Dear all,

Recently I deposited a structure to PDB. However, I was told

>> The R value of SF check are different from your reported value.
>> 
>>     R work in SF check = 0.2859
>>     your reported R work = 0.1474
>> Also there are no R free flags in your sending files, but you reported R 
>> free value in your all deposition.





So, I rerun my deposited file with phenix.refine, and it gave a R-work=0.1475, R-free=0.1742. 

However, when I tried to run the same file with refmac5, error came with "Free R label has not been set". I guess phenix.refine gives Rree-R label that other program could not recognize. 

Could anyone please help me to solve this problem?

Thank you very much in advance.

I don't know why structure refined with phenix.refine has such problem. I wish this problem will disappear in the future, since I
 so like phenix.refine.


Best, 

Vinson,Liang