Re: [phenixbb] PDB Tools and CNS formatted structure factors

Hi Joseph,

Is there anyway with the PDB Tools to renumber protein chains?

Did you mean "renumber residues in protein chains"? Do you want it protein-specific (that is say DNA/RNA and other non-protein molecules will be ignored)? Anyway, I just added the simplest version of renumbering residues in chains will be available in the next PHENIX version (nightly build): phenix.pdbtools model.pdb renumber_residues=true I can add more functionality as needed/requested.

Also, which module in Phenix is used to read in and convert CNS formatted ascii structure factors to the mtz read by phenix other then using ccp4.

The tool for doing this and more is available from PHENIX GUI and called "Reflection file editor". Pavel.