Re: [phenixbb] Rosetta installation problems (II)

Hi Luca, Please try the latest version of Rosetta 3.10. There was a bug with macOS 10.13.6 that is fixed. I have tested Rosetta 3.10 on macOS 10.13.6 and Xcode 10. The rosetta.run_tests step completes without using massive amounts of memory. Also, if you use the GUI for phenix.rosetta_refine, please use the latest nightly build, dev-3283. There was a bug where the final R-values are not stored, which caused the GUI to crash. -- Billy K. Poon Research Scientist, Molecular Biophysics and Integrated Bioimaging Lawrence Berkeley National Laboratory 1 Cyclotron Road, M/S 33R0345 Berkeley, CA 94720 Tel: (510) 486-5709 Fax: (510) 486-5909 Web: https://phenix-online.org On Sat, Oct 6, 2018 at 11:49 AM Luca Jovine wrote:

Actually Simone, I just found that my problem has already been reported (I’m on 10.13.6):

...

Currently, there is an issue with using phenix.rosetta_refine and macOS High Sierra (10.13). The rosetta.run_tests step in the installation instructions is generating large files and using large amounts of memory.

so it’s apparently a Mac-specific issue and cannot also be the cause of your RuntimeError...

Begin forwarded message:

*From: *Luca Jovine *Subject: **Re: [phenixbb] Rosetta installation problems* *Date: *6 October 2018 at 15:05:50 CEST *To: *"[email protected]"

I don’t think the two things are related, but - when running under Mac OS the refinement tests of Rosetta (3.9 = 2018.09.60072) with PHENIX 1.14-3260 - I am also getting a (different) RuntimeError. The same test suite worked just fine with 1.13, so maybe there’s some general Rosetta compatibility issue with 1.14? Best, Luca

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