Dear all..

How do I move a fem map back to the protein molecule?

I did

`phenix.fem PHASER.1-coot-1_refine_001.pdb PHASER.1-coot-0_refine_data.mtz`

to generate the fem map, but when I open with coot

`coot PHASER.1-coot-1_refine_001.mtz PHASER.1-coot-1_refine_001.pdb`

and then file->open map->fem.cpp4...

the fem map does not cover the protein (as shown in .png attached)

I am not sure if this is phenix (a missing option?) or coot related ...

thanks