Raja Map generation has been turned off by default. To enable set refinement.xray-data.output.maps=True in your .def file -----Original Message----- From: [email protected] [mailto:[email protected]]On Behalf Of Raja Dey Sent: Monday, March 30, 2009 12:18 PM To: PHENIX user mailing list Subject: [phenixbb] map files are missing in the output Hi, I recently installed phenix 1.4-3 and ran a refinement as follows: phenix.refine ../zn/new-nfat1-dna_2.pdb ../nfatgata.mtz simulated_annealing=true strategy=rigid_body+individual_sites+group_adp output.prefix=new2-1 In the output I found all the files except two map files. Then I ran the earlier version(1.3-final) I had in my laptop using the same command and same files as above and I got all the files including two map files as well. Is there anything wrong that I might have done in 1.4-3? Raja _______________________________________________ phenixbb mailing list [email protected] http://www.phenix-online.org/mailman/listinfo/phenixbb