Hi Andrew, best way is to write a Python script that will use CCTBX to do this. If you know Python and CCTBX then luck is with you! I envisage a page long script that would do everything. If I do it myself that would cost me about 30 minutes or so.. Pavel On 11/29/16 14:21, Andrew Morin wrote:
Hello,
I am trying to find a convenient way to generate maps using phenix.mtz2map at increasingly greater values of d_min.
For example:
I have a .mtz file of a structure solved at 2.4A. I run phenix.mtz2map with d_min=none and obtain a map using all of the resolution data. I would like to also create 10 more maps with d_min = 3.4, 4.4, 5.4, 6.4,...12.4A. An mtz of 1.7A would increment at 2.7, 3.7...11.7A, etc.
Might anyone know of a handy way to automate this over a large number of mtz files?
ALTERNATIVELY - I am performing a phenix.cut_out_density step prior to this. So if it might be easier to automate a incrementing high resolution cutoff in phenix.cut_out_density, that would also work.
Thanks for your help.
-Andrew