Hi Iram,
A good place to start is to read the documentation for tools in cryo-EM:
https://phenix-online.org/documentation/overviews/cryo-em_index.html
We also have a couple of video tutorials on our youtube channel (
https://www.youtube.com/@PhenixTutorials), for example for
phenix.real_space_refine:
https://www.youtube.com/watch?v=shmBHtyUdCc
Best wishes,
Dorothee
On Thu, Dec 12, 2024 at 5:54 PM iram aziz
Hello All. I got a nice 2.45 Angstrom map from cryo em data. I checked handedness, map model fitting on the chimera and opened in the coot. It looks nice. Can you please give me suggestions about the Phenix refinement steps. Thanks Iram _______________________________________________ phenixbb mailing list -- [email protected] To unsubscribe send an email to [email protected] Unsubscribe: phenixbb-leave@%(host_name)s
-- Dorothee Liebschner, PhD (she/her) Research Scientist Molecular Biophysics and Integrated Bioimaging Division Lawrence Berkeley National Laboratory 1 Cyclotron Road, M/S 91R0183 Berkeley, CA 94720 Web: https://phenix-online.org