Hi Oliver, why not.. I think we can compute map from model and then subtract it from the experimental input map (after scaling them somehow). No I did not have that plan because it wasn't clear to me how such map can be helpful (especially since we don't do best possible job on B factor refinement). I will add this option. Pavel On 3/15/16 10:25, Oliver Clarke wrote:
Hello,
is there any possibility of (or current plan for) including the capacity in a future PHENIX release to calculate a residual map automatically after phenix.real_space refine, (i.e. simulating a map from the model incorporating corrections for B-factor variation and calculating a difference map with the experimental map)? This would be very convenient when building into EM maps.
Cheers, Oli