Hi Pan,
This means your computer does not have enough memory for this method. Try instead:  (1) cut out a box of density that contains the part you want with phenix.map_box.  Then (2) use cut_out_density to get just the right part from that new map.
All the best,
Tom 

On Tue, Aug 13, 2019 at 10:20 PM xiaowp82@hotmail.com <xiaowp82@hotmail.com> wrote:
Hello everyone

I want to use a EM map as a model for molecular replacement. When I run "cut_out_density" in PHENIX_GUI,  an error message was appeared: "Resolve error message: Could not run resolve with size 547".   Does anyone meet the same problem and know how to sovle it? Thanks a lot!

Sincerely yours

Pan 

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--
Thomas C Terwilliger
Laboratory Fellow, Los Alamos National Laboratory
Senior Scientist, New Mexico Consortium
100 Entrada Dr, Los Alamos, NM 87544
Tel: 505-431-0010