Hi,
Do you think you can link one ligand to two other molecules. (one NON-POLYMER and one peptide).
I guess my other option is to create a new ligand.
I assumed you pre-deleted the atoms that are supposed to be deleted in the link?
I did delete them and it complained and I put them back in and it’s complaining. Pretty similar errors, but I’m wondering if it’s just the second link that’s causing problems.
I’ve got files
PNS.cif
ACE.cif
PNS-SER.cif
ACE-PNS.cif
apply_link_ACE-PNS.def
apply_link_PNS-SER.def
Heidi