Hi,
I noticed Phenix refine default settings are using data labels "Imean" and "SigImean" instead of F and SigF.
ok, what you say: a) makes sense to me and b) matched my expectations.. So that's a good start, all right!
I searched this on the internet and found a post that titled "Phenix.refine Defaults Considered Harmful"
Ha-ha! I thought folk learned from recent hugely embarrassing ContaMiner rant on ccp4bb recently. It sounds like not all may be then. Regardless: Take home message is: please contact developers to resolve the issue first before posting controversial issues. Most of the time developers will be happy to collaborate and do their best to solve the issue.
( web link http://xray0.princeton.edu/~phil/Facility/phenix_fubar.html http://xray0.princeton.edu/%7Ephil/Facility/phenix_fubar.html ). One point in this post shows that "the first thing the program does is ignore that structure factor data and use the IMEAN data instead."
Sure! Iobs are more important than Fobs. Isn't it obvious? If it is not obvious then I'm really keen to hear why. I'm sure that's going to be a learning experience (for me at least!)! All the best, Pavel