Yes it is !
-rw-r--r-- 1 ebettler prabi 5,6G oct. 14 14:51 Phenix-2.0-5824-CUDA12-Linux-x86_64.sh
-rw-r--r-- 1 ebettler prabi 2,8G oct. 14 14:48 'Phenix-2.0-5824-Linux-x86_64(1).sh'
-rw-r--r-- 1 ebettler prabi 2,8G oct. 14 14:41 Phenix-2.0-5824-Linux-x86_64.sh
-rwxr-xr-x 1 ebettler prabi 5,6G oct. 14 14:30 Phenix-2.0-5848-CUDA12-Linux-x86_64.sh
-rw-r--r-- 1 ebettler prabi 3,1G oct. 16 09:35 phenix-installer-1.21.2-5419-intel-linux-2.6-x86_64-centos6.tar.gz
Hi Emmanuel,
How large are the downloaded files? They should be around 2.8 GB or 5.6 GB for the CUDA version. How fast is the download?
--
Billy K. Poon
Research Scientist, Molecular Biophysics and Integrated Bioimaging
Lawrence Berkeley National Laboratory
1 Cyclotron Road, M/S 91R0183
Berkeley, CA 94720
Fax: (510) 486-5909
Web: https://phenix-online.orghttps://MailInBlack.univ-lyon1.fr/securelink/?url=https://phenix-online.org&key=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
On Thu, Oct 16, 2025 at 3:32 AM Emmanuel BETTLER mailto:[email protected]> wrote:
Hi Billy,
thank you for your reply.
The checksum is indeed incorrect. But when I try to download the binary again, it still has the same checksum on my computer!
I tried versions 5824 and 5848, with and without CUDA, and all versions return the same error on different packages.
I don't know what to think!
I'm open to any suggestions.
Emmanuel
Le 06/10/2025 à 19:21, Billy Poon a écrit :
Hi Emmanuel,
Can you verify the checksum of the installer? It looks like the file may be corrupted and could not be extracted correctly. The SHA256 checksum is
60fde2a0fc7c42cecdc2d0ae5e68079aa02908d22fac280486ea5463d4d71a15 Phenix-2.0-5824-Linux-x86_64.shhttps://MailInBlack.univ-lyon1.fr/securelink/?url=https://MailInBlack.univ-lyon1.fr&key=eyJsYW5nIjoiRlIiLCJ1cmwiOiJodHRwczovL01haWxJbkJsYWNrLnVuaXYtbHlvbjEuZnIvc2VjdXJlbGluay8_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
If the checksum does not match, please re-download the file.
--
Billy K. Poon
Research Scientist, Molecular Biophysics and Integrated Bioimaging
Lawrence Berkeley National Laboratory
1 Cyclotron Road, M/S 33R0345
Berkeley, CA 94720
Fax: (510) 486-5909
Web: https://phenix-online.orghttps://MailInBlack.univ-lyon1.fr/securelink/?url=https://MailInBlack.univ-lyon1.fr&key=eyJsYW5nIjoiRlIiLCJ1cmwiOiJodHRwczovL01haWxJbkJsYWNrLnVuaXYtbHlvbjEuZnIvc2VjdXJlbGluay8_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
On Thu, Oct 2, 2025 at 5:33 AM mailto:[email protected]> wrote:
Hi,
on a linux ubuntu 22.04 distribution, when i'm trying to install latest Phenix nightly version 2.0-5824, i have the following error message:
[...]
PREFIX=/home/ebettler/Soft/phenix-2.0-5824
Unpacking bootstrapper...
Unpacking payload...
entry_point.py:256: DeprecationWarning: Python 3.14 will, by default, filter extracted tar archives and reject files or modify their metadata. Use the filter argument to control this behavior.
entry_point.py:256: DeprecationWarning: Python 3.14 will, by default, filter extracted tar archives and reject files or modify their metadata. Use the filter argument to control this behavior.
concurrent.futures.process._RemoteTraceback:
'''
Traceback (most recent call last):
File "concurrent/futures/process.py", line 432, in wait_result_broken_or_wakeup
File "multiprocessing/connection.py", line 251, in recv
TypeError: InvalidArchiveError.__init__() missing 1 required positional argument: 'msg'
'''
The above exception was the direct cause of the following exception:
Traceback (most recent call last):
File "entry_point.py", line 244, in _constructor_extract_conda_pkgs
File "concurrent/futures/_base.py", line 449, in result
File "concurrent/futures/_base.py", line 401, in __get_result
concurrent.futures.process.BrokenProcessPool: A process in the process pool was terminated abruptly while the future was running or pending.
The above exception was the direct cause of the following exception:
Traceback (most recent call last):
File "entry_point.py", line 691, in <module>
File "entry_point.py", line 681, in main
File "entry_point.py", line 582, in _constructor_subcommand
File "entry_point.py", line 246, in _constructor_extract_conda_pkgs
RuntimeError: Failed to extract /home/ebettler/Soft/phenix-2.0-5824/pkgs/chem_data-2.0.5824-pyhe0d8492_0.conda: A process in the process pool was terminated abruptly while the future was running or pending.
[PYI-197168:ERROR] Failed to execute script 'entry_point' due to unhandled exception!
What's wrong ?
Any advice are welcome !
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