Vincent
You can run ReadySet! thus
phenix.ready_set model.pdb
to, among other things, generate a restraints file for any
non-standard residues. Simply pass this to phenix.refine.
Nigel
On Thu, May 13, 2010 at 11:36 AM, vincent Chaptal
Dear phenixbb,
i have a protein on which a cysteine has been modified and I can't find a way to refine my structure with it. this seams like a fairly easy problem as a lot of people are refining structures with post-translational modifications, but i can't find the info on how to do it. Could someone point me to a web page explaining it?
If i understand correctly, i have to create the modified residue, create the restraints, and define it as a L-peptide. Is that correct? thanks a lot vincent
--
Vincent Chaptal
Dept. of Physiology at UCLA
http://www.physiology.ucla.edu/Labs/Abramson/index.html http://www.physiology.ucla.edu/Labs/Abramson/index.html/
Phone: 1-310-206-1399
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