Thanks, Nat!

Just to be clear: the format for lists on the command line for autobuild is different than for a parameters file.  In a parameters file, you leave off the quotes for the list; on the command line you use quotes around the entire list.

All the best,
Tom T


On Jul 14, 2010, at 4:40 PM, Nathaniel Echols wrote:

On Wed, Jul 14, 2010 at 3:04 PM, J J <[email protected]> wrote:
Tom,

I have tried what you suggested.
rebuild_chain_list= "A B"
rebuild_res_end_list= "50 50"
rebuild_res_start_list="10 10"
Both do not work.
Try leaving the quotes out or enclosing only the individual chain IDs or residue numbers in quotes - these parameters are all supposed to be lists of values, and the parser groups anything in quotes as a single list item.

-Nat
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Thomas C. Terwilliger
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