Hi Philippe,
Thank you for reporting the issue. Can you please send me (OFF list) the
file you used as input so I can fix the issue? All files sent to me are
treated as confidential.
Best regards,
Oleg Sobolev.
On Fri, May 5, 2023 at 2:02 AM CUNIASSE Philippe
Dear all,
I tried to use the phenix.model_idealization code of phenix (in command line) following the syntax suggested in https://phenix-online.org/documentation/reference/model_idealization.html
phenix.model_idealization xxxx.pdb
But the code stops on the error :
Traceback (most recent call last):
File "/Applications/phenix-1.20.1-4487/build/../modules/cctbx_project/mmtbx/command_line/model_idealization.py", line 1118, in <module>
run(sys.argv[1:])
File "/Applications/phenix-1.20.1-4487/build/../modules/cctbx_project/mmtbx/command_line/model_idealization.py", line 1106, in run
mi_object.run()
File "/Applications/phenix-1.20.1-4487/build/../modules/cctbx_project/mmtbx/command_line/model_idealization.py", line 548, in run
self._setup_model_h()
File "/Applications/phenix-1.20.1-4487/build/../modules/cctbx_project/mmtbx/command_line/model_idealization.py", line 478, in _setup_model_h
params_h.pdb_interpretation = self.model._pdb_interpretation_params.pdb_interpretation
AttributeError: 'NoneType' object has no attribute 'pdb_interpretation'
Thanks in advance for any suggestion to solve this.
Best regards.
Philippe.
-----------------------------------------------
Philippe Cuniasse, PhD/HDR.
Institut de Biologie Integrative de la cellule.
UMR 9198 CNRS-CEA-Univ Paris Sud
Bat 144 CE-Saclay
91191 Gif-sur-Yvette Cedex
France
Tel: (33) 1 69 08 56 35
Fax: (33) 1 69 08 47 12
Email: [email protected]
Web: http://biodev.cea.fr/rasmot3d/
*[image: signature_3031510868]*[image: signature_394100311][image: signature_2972121752]
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