I have seen that as well, not sure why that is. I guess it has to do with stability issues. Not sure if you can enforce the use of an ML target there.

Peter

----- Original Message -----
From: Jianghai Zhu <[email protected]>
Date: Sunday, March 25, 2007 7:14 pm
Subject: Re: [phenixbb] ls_wunit_k1
To: PHENIX user mailing list <[email protected]>

> All right.  The target for my TLS is also LS.  Is that intentional
> too?
> Jianghai
>
> +++++++++++++++++++++++++++++++
> Jianghai Zhu, Ph.D
> CBR Institute for Biomedical Research
> Department of Pathology
> Harvard Medical School
> 200 Longwood Ave., Boston, MA 02115
> Ph: 617-278-3211
> Fx: 618-278-3232
> +++++++++++++++++++++++++++++++
>
>
>
> On Mar 25, 2007, at 10:55 PM, Petrus H Zwart wrote:
>
> > Yes.
> >
> > It is more robust and used in the so called MZ protocol. It has
> a 
> > large radius of convergence.
> >
> > Peter
> >
> >
> >
> > ----- Original Message -----
> > From: Jianghai Zhu <[email protected]>
> > Date: Sunday, March 25, 2007 6:25 pm
> > Subject: Re: [phenixbb] ls_wunit_k1
> > To: PHENIX user mailing list <[email protected]>
> >
> > > The default target for rigid body is LS from "phenix.refine --
> show-
> > >
> > > defaults=all".  Is this intentional?
> > >
> > > Jianghai
> > >
> > > +++++++++++++++++++++++++++++++
> > > Jianghai Zhu, Ph.D
> > > CBR Institute for Biomedical Research
> > > Department of Pathology
> > > Harvard Medical School
> > > 200 Longwood Ave., Boston, MA 02115
> > > Ph: 617-278-3211
> > > Fx: 618-278-3232
> > > +++++++++++++++++++++++++++++++
> > >
> > >
> > >
> > > On Mar 25, 2007, at 10:14 PM, Jianghai Zhu wrote:
> > >
> > > > I checked my log file and didn't find "automatic adjustment".
> > > My
> > > > main target is mlhl.  However, the target function for rigid
> > > body
> > > > is ls_wunit_k1.  I didn't choose that.  Is LS the default for
> > > rigid
> > > > body?
> > > >
> > > > Jianghai
> > > >
> > > > +++++++++++++++++++++++++++++++
> > > > Jianghai Zhu, Ph.D
> > > > CBR Institute for Biomedical Research
> > > > Department of Pathology
> > > > Harvard Medical School
> > > > 200 Longwood Ave., Boston, MA 02115
> > > > Ph: 617-278-3211
> > > > Fx: 618-278-3232
> > > > +++++++++++++++++++++++++++++++
> > > >
> > > >
> > > >
> > > > On Mar 25, 2007, at 10:00 PM, Ralf W. Grosse-Kunstleve wrote:
> > > >
> > > >>> You are right.  Somehow, the default target function in
> > > >>> refinement.bulk_solvent_and_scale is LS, not ML.
> > > >>
> > > >> The default (phenix.refine --show-defaults=all) is actually ml.
> > > >> However, if the main target is set to ls the 
> > bulk_solvent_and_scale
> > > >> target is automatically reset to ls, too. There should be
> > > >> corresponding
> > > >> messages in the log file ("automatic adjustment").
> > > >> Ralf
> > > >> _______________________________________________
> > > >> phenixbb mailing list
> > > >> [email protected]
> > > >> http://www.phenix-online.org/mailman/listinfo/phenixbb
> > > >
> > > > _______________________________________________
> > > > phenixbb mailing list
> > > > [email protected]
> > > > http://www.phenix-online.org/mailman/listinfo/phenixbb
> > >
> > >
> >
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>
>