Thanks.
The options keep changing with version updates.
The command line "phenix.pdbtools --help" does NOT list all options.

After some digging I found that the equivalent option is
model_statistics=true without the preceding '--'.

Thanks,
Abhinav

JCSG@SSRL, SLAC
Phone: (650) 926-2992
Fax: (650) 926-3292

On 10/21/2011 10:07 AM, Ed Pozharski wrote:

Normally you should be able to get the list of options by just running
the command without parameters.  It may, of course, be incomplete: the
version that I have lists both --show-adp-statistics and
--show-geometry-statistics as "Show complete ADP (B-factors)
statistics.", which is unlikely.

On Fri, 2011-10-21 at 09:45 -0700, Abhinav Kumar wrote:

Hi,

I had been using the pdbtools to obtain the rmsd on various geometry
parameters using the command:
phenix.pdbtools my.pdb --show-geometry-statistics

Now pdbtools does not recognize the option
"--show-geometry-statistics"

What is the option now?

I am using phenix-1.7.2-869.
-- 

Thanks, 
Abhinav 

JCSG@SSRL, SLAC 
Phone: (650) 926-2992 
Fax: (650) 926-3292 



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