Re: [phenixbb] Masking a ligand

Hi Esmael, remove the ligand from PDB file or set occupancy of the ligand to zero and use phenix.maps to compute any number of desired maps. To use phenix.maps: - from the command line type phenix.maps and hit Enter, then follow the instructions on the screen; - from PHENIX GUI use Maps -> Create Maps. Pavel. On 7/8/10 12:25 PM, esmael wrote:

Hi,

I am working with a protein that has many ligands; I need a density map in the "MTZ" format without ligands. Is there a way to do this?

Thanks a lot, Esmael

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