I am having a problem with mr_rosetta where I cannot make it past the rebuild step.  I have made fragment files using the old Robetta Server and I am using a hhpred alignment file, but even if I try with a model_already_placed when I reach rebuilding, I get the following error.

protocols.looprelax: ===
protocols.looprelax: ===   Remodel    
protocols.looprelax: ===

ERROR: frag_libs().size() > 0
ERROR:: Exit from: src/protocols/comparative_modeling/LoopRelaxMover.cc line: 47
7

 My PHENIX_ROSETTA_PATH is pointed at /share/apps/necat/programs/rosetta3.4 so I believe I am using version 3.4 of rosetta.

Kay Perry
NE-CAT
9700 S. Cass Ave.
Bldg. 436 E007
Argonne, IL 60439
630-252-0692

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