Hi I am giving new to Phenix and the Phenix GUI. For starters I am trying
to run the prime and switch strategy in Phenix.
I know all my inputs are fine (see below) but the program aborts ( GUI
turns red ) after a few seconds.
I checked the resolve.com file in the directory and it has a command
"unlimit" which in Leopard causes the following output to be echoed to the
stdout
"unlimit: descriptors: Can't remove limit (Invalid argument)"
Once I deleted the unlimit command I can run the script just fine from a
shell.
My question is how can I tweak the Phenix GUI so that I dont have to run
everything from the shell by manually editing the resolve.com file.
The script that stops the GUI is reproduced here.
Thanks for your help
Hari Jayaram
Postdoc , Brandeis University
script:
#!/bin/csh
setenv SOLVEDIR /usr/local/phenix-1.3b-rc6/solve_resolve/ext_ref_files
setenv SOLVEBIN
/usr/local/phenix-1.3b-rc6/build/mac-intel-osx/solve_resolve/exe
#
setenv CCP4_OPEN UNKNOWN
setenv SYMOP $SOLVEDIR/symop.lib
unlimit
#
$SOLVEBIN/resolve<