I don't think pdbtools has this right now, although it can probably be added with minimal effort.  If you're willing and able to edit your model interactively, phenix.pdb_editor is much more flexible (but it's a GUI, so not suitable for automated use).

Of course I'm pretty sure Coot can do this too.

-Nat

On Wed, Feb 26, 2014 at 9:21 PM, Rojan Shrestha <rojan@riken.jp> wrote:

Hello,

I have found the program phenix.pdbtools. Maybe, it can renumber residues of pdb. I have found the options renumber_residues options but I am unable to see the options for starting residues.

I have pdb starts from 1 and want to renumber 1 into 250. Can somebody tell me how to put the option for starting residue?

Regards,

Rojan 

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