On 01/20/2012 03:45 AM, Salameh, Mohd A., Ph.D. wrote:
Hi Everybody,
I encountered a problem recently in converting my PDB file to mmcif
using the pdb_extract tool in rcsb.
Can you give this a try (from the openbabel package on Ubuntu or Debian Linux): babel [INPUT].pdb [OUTPUT].mmcif Regards, Francois.
It simply writes out an empty
file!! I wonder if any of you have faced such a problem before and
know the solution!! I carefully examined the PDB file header and I
couldn’t really find a reason why this PDB failed to be converted. I
only use PHENIX for molecular replacement and refinement. I used the
default TLS refinement so I assume the whole structure will be refinedas a group. I hope somebody is familiar withthis can help me out.
Thank you very much, Mohd
_______________________________________________ phenixbb mailing list [email protected] http://phenix-online.org/mailman/listinfo/phenixbb