Dear Matthias, Two ' ( ( ' and one ' )' in phenix.pdbtools input.cif remove="(chain IN and not (phosphate or ribose)" is inoffensive - - it seems ? Jorge
Hi everyone,
I am trying to truncate an RNA chain to backbone only using phenix.pdb tools with this command:
phenix.pdbtools input.cif remove="(chain IN and not (phosphate or ribose)"
I get:
AtomSelectionError: RuntimeError: Atom selection syntax error at word "phosphate". Atom selection string leading to error: (chain IN and not (phosphate or ribose)
Based on https://phenix-online.org/documentation/reference/atom_selections.htmlhttps://phenix-online.org/documentation/reference/atom_selections.htmlI I thought “phosphate” and “ribose” should be valid selection key words, but can’t figure out what I am doing wrong and would appreciate your help : )
Thanks in advance and best wishes, Matthias _______________________________________________ phenixbb mailing list -- [email protected] To unsubscribe send an email to [email protected] Unsubscribe: phenixbb-leave@%(host_name)s