Re: [phenixbb] Error running phenix.rosetta_refine tests with Rosetta 3.8

Oliver My Rosetta 3.7 is 2016.32. Not sure why we are different. Cheers Nigel --- Nigel W. Moriarty Building 33R0349, Molecular Biophysics and Integrated Bioimaging Lawrence Berkeley National Laboratory Berkeley, CA 94720-8235 Phone : 510-486-5709 Email : [email protected] Fax : 510-486-5909 Web : CCI.LBL.gov On Tue, Mar 21, 2017 at 8:19 AM, Oliver Clarke wrote:

Hi Nigel,

I tried with rosetta 3.7 (2016.46) and phenix dev-2719, and this time compilation using rosetta.build_phenix_interface was successful (scons finished building targets with no errors), but when I run rosetta.run_tests it still crashes, though with a different error (see attached log). Any ideas as to how to fix?

Cheers Oli

On Mar 20, 2017, at 7:31 PM, Nigel Moriarty wrote:

Oliver

We are currently only supporting up to Rosetta 3.7 as a c++11 compiler is required for any subsequent versions. We have compiled using a c++11 compiler with no problems so I suggest you revert to 3.7 or check the logs for compilation problems.

Cheers

Nigel

--- Nigel W. Moriarty Building 33R0349, Molecular Biophysics and Integrated Bioimaging Lawrence Berkeley National Laboratory Berkeley, CA 94720-8235 Phone : 510-486-5709 <(510)%20486-5709> Email : [email protected] Fax : 510-486-5909 <(510)%20486-5909> Web : CCI.LBL.gov http://cci.lbl.gov/

On Mon, Mar 20, 2017 at 9:34 AM, Oliver Clarke wrote:

...

Hi,

Phenix rosetta refinement worked with previous versions of rosetta and phenix, but with the latest Rosetta version (3.8) and latest phenix nightly I get a crash when running rosetta.run_tests after building the rosetta phenix interface, which runs a test run of phenix.rosetta_refine. It gets to the stage of generating initial models and then crashes - see attached log. Ideas for a fix welcome!

Cheers Oli

_______________________________________________ phenixbb mailing list [email protected] http://phenix-online.org/mailman/listinfo/phenixbb Unsubscribe: [email protected]