I have taken over a high resolution set of protein data which has H atoms built in.

For non-H atoms having 2 or three H atoms these H atoms each carry the same atom number

in the pdb file.

Phenix will not accept this format.

Should I delete all H-atoms and reassign them in the next Phenix refinement run?

  

Rex Palmer
http://www.bbk.ac.uk/biology/our-staff/emeritus-staff
http://rexpalmer2010.homestead.com