Hello Iram,
The general workflow for Cryo-EM is described here:
https://phenix-online.org/documentation/overviews/cryo-em_index.html
It looks like you are ready to refine your model, so the tool for it is
phenix.real_space_refine:
https://phenix-online.org/documentation/reference/real_space_refine.html
that also has a video tutorial.
Let us know if you have any questions.
Best regards,
Oleg Sobolev.
On Thu, Dec 12, 2024 at 5:54 PM iram aziz
Hello All. I got a nice 2.45 Angstrom map from cryo em data. I checked handedness, map model fitting on the chimera and opened in the coot. It looks nice. Can you please give me suggestions about the Phenix refinement steps. Thanks Iram _______________________________________________ phenixbb mailing list -- [email protected] To unsubscribe send an email to [email protected] Unsubscribe: phenixbb-leave@%(host_name)s