grep "^ATOM " filename.pdb | cut -c 61-66 | awk '{s+=$1;} END {print s/NR;}'
"Nobody likes a show off, Private"
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<div>-------- Original message --------</div><div>From: Chen Zhao </div><div>Date:10/04/2014 4:03 PM (GMT-05:00) </div><div>To: PHENIX user mailing list </div><div>Subject: [phenixbb] Calculate average B-factor? </div><div>
</div>Dear all,
I am just wondering whether there is a command line tool in phenix that calculates the average B-factor of a PDB file? Can it deal with the ANISOU records (from TLS refinement or not) properly? I looked into previous posts but the --show-adp-statistics option in phenix.pdbtools seems to be no longer available in the version (1.9-1678) I installed.
Thank you so much,
Chen
