Re: [phenixbb] Command to call/read external file when runningphenix.refine from

Yeah that works although not as elegant.....

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Nathaniel Echols 23/10/2009 14:37 >>> On Oct 23, 2009, at 6:31 AM, Ashley Pike wrote: I am running phenix.refine(v.1.5.2) from the command line using a batch file containing all my customised options ie. phenix.refine my_parameters. From this batch file (my_parameters) I also want to include additional geometric and NCS restraints. Rather than have them clutter things up, I want to call/invoke them from an external file instead. I had been told that this is possible using the command 'include file <filename>' but it seems that this is not doing what I had hoped. When run in this way phenix.refine doesn't complain but is not using the restraints. Needless to say everything is fine when I actually include the information directly in the batch file. Any hints what I am doing wrong?

What happens when you simply pass all of the parameter files as command-line arguments? It should parse all of them and combine the settings. -------------------- Nathaniel Echols Lawrence Berkeley Lab 510-486-5136 [email protected] _______________________________________________ phenixbb mailing list [email protected] http://www.phenix-online.org/mailman/listinfo/phenixbb