Hi Lau,

It doesn't sound normal to me to have a missing directory while AutoBuild is running ... I wonder if you are able to look and see what directories are actually present? If you go to

Phenix_Ligandfit/AutoBuild_run_5_

and then look in TEMP0

is there an AutoBuild_run_1_ directory? Run 2? ...

Also have a look at the overall log file in

Phenix_Ligandfit/AutoBuild_run_5_/AutoBuild_run_5_1.log

Does the end of that file have any clues?

all the best,

Tom T

From: [email protected] [[email protected]] on behalf of Lau Sze Yi (SIgN) [[email protected]]
Sent: Tuesday, April 07, 2015 1:06 AM
To: [email protected]
Subject: [phenixbb] Autobuild error

Hi,

I did an Autobuild run. The Status panel indicated that the run is finished. In the Model building panel the status of run# 5 still says running (See attached screenshot). Is this normal? And when I click on run #4 to Open in Coot, I get an error message indicating that the directory could not be found (see attachment). What is wrong and how can I fix this?

I am using version phenix-1.9-1692 on Mac.

Regards,

Sze Yi

Research Fellow

Singapore Immunology Network (SigN)

8A Biomedical Grove, #03-06 Immunos,

Singapore 138648

DID: +65 6407 0640

Fax: +65 6407 0640