Hi Andre,
ok, done! Any next version after dev-4822 will have it. Just run like
phenix.reciprocal_space_arrays data.mtz model.pdb
and output MTZ file will have CENTRIC_FLAGS array.
https://phenix-online.org/download/nightly_builds.cgi?show_all=1
Pavel
Dear Pavel, thank you for your kind reply.Yes, some of my students are familiar with using CCTBX and will try now the access the centric_flags method.However, if you think that it could also be incorporated into phenix.reciprocal_space_arrays, to be used in the upcoming downloaded versions of Phenix, it would be greatly appreciated.With best regards,Andre.
Em qua., 21 de dez. de 2022 às 20:03, Pavel Afonine <[email protected]> escreveu:
Hi Andre,
> Is there a way to label centric and acentric reflections in the .mtz
> file and output an additional column, let's say, with values 0
> (acentric) and 1 (centric), similar to R_free flags?
>
> Many thanks for your attention.
I'm not aware of Phenix tool to do this. However, if you use CCTBX then
you can access these flags as as a method of miller array class (called
"centric_flags").
I can help with the script if interested.
Alternatively, I can extend this quite old command line program:
phenix.reciprocal_space_arrays -- it outputs lots of this kind of
technical arrays but just not the centric/acentric flag, but I can add it.
Pavel
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