Dear all,
I am a novice user of phenix.  I am trying to obtain phases for SAD dataset collected at 2.5 angs from autosol.But when i give the phases to autobuild, the R-factor is not decreasing below 49%. Also, in warp, it is unable to built with a message "encounterd an unknown element". Can someone suggest me what could be the problem.

Thanks for any suggestion in advance.
Tara Kashav

On 9/3/07, phenixbb-request@phenix-online.org <phenixbb-request@phenix-online.org> wrote:
Send phenixbb mailing list submissions to
        phenixbb@phenix-online.org

To subscribe or unsubscribe via the World Wide Web, visit
         http://www.phenix-online.org/mailman/listinfo/phenixbb
or, via email, send a message with subject or body 'help' to
        phenixbb-request@phenix-online.org

You can reach the person managing the list at
        phenixbb-owner@phenix-online.org

When replying, please edit your Subject line so it is more specific
than "Re: Contents of phenixbb digest..."


Today's Topics:

   1. command-line Patterson maps (Bryan W. Lepore)


----------------------------------------------------------------------

Message: 1
Date: Sun, 2 Sep 2007 00:07:51 -0500 (CDT)
From: "Bryan W. Lepore" <bryanlepore@mail.utexas.edu>
Subject: [phenixbb] command-line Patterson maps
To: phenixbb@phenix-online.org
Message-ID:
        <Pine.LNX.4.64.0709020001190.16588@cpe-70-116-17-26.austin.res.rr.com >
Content-Type: TEXT/PLAIN; charset=US-ASCII; format=flowed

will phenix calculate Pattersons from trial sites or a reflection file on
the command line?  i.e. something besides hacking what is already there.

e.g. cns has predict_patterson.inp.  i can't seem to find a way to do it
from the command line - such as `phenix.patterson --sg=94
reflections.mtz`.  i saw phenix.maps but that looks like electron density
only.

-bryan


------------------------------

_______________________________________________
phenixbb mailing list
phenixbb@phenix-online.org
http://www.phenix-online.org/mailman/listinfo/phenixbb


End of phenixbb Digest, Vol 22, Issue 1
***************************************



--
Tara Kashav,
Dr. S. Gourinath's Lab,
Lab No 430,
School of Life Sciences,
Jawaharlal Nehru University,
New Delhi - 110067