Hi Mirek,

based on your description this sounds like a bug or undesired feature at least! Could you please send me the files so that I can repeat your experience myself and see what's happening?

As a work-around you can re-generate flags as Tim suggested but chances are someone annoying like myself asks to prove no memory left from previous set and that is very hard to prove, and if not proven there will be a doubt! Although indeed, re-generating and running some refinement should be just fine, I agree!

Good luck!
Pavel

On 6/24/19 21:09, Cygler, Miroslaw wrote:

Hi Phenixers,
I have copied mtz file to a new file with a lower resolution limit using the "Reflection file editor” tool. I copied all arrays to the output file. When I attempted to continue refinement with the new mtz file, a message appears saying that there are no R-free flags in the mtz file. Yet, the new file contains the R-free-flags column but the values are inverted, 1 is changed to 0 and 0 is changed to 1. In the output option dialog the box “Preserve original flag values” was checked.

How to fix this?

Thanks,

Mirek
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