Janxon

You have to copy the Beta 1-4 link into another file, edit it to make a alpha 2-6 link and supply it to phenix.refine along with a selection. I'd be happy to help. Please send me the PDB directly (or just the residues involved) and we can get a working set of restraints.

Nigel

On 4/7/10 3:15 AM, JXQI wrote:

Dear all,

I am refining a structure complexed with LSTc (alpha 2,6-linked galactose,i.e. SIA-GAL-NAG-GAL).I know that the BETA1-4 or BETA1-3 in the mon-lib could restrain the bond distance,but I could not find the links between the SIA and GAL......any suggestions are appreciated.

Best regards

Janxon
_______________________________________________
phenixbb mailing list
phenixbb@phenix-online.org
http://phenix-online.org/mailman/listinfo/phenixbb
  

-- 
Nigel W. Moriarty
Building 64R0246B, Physical Biosciences Division
Lawrence Berkeley National Laboratory
Berkeley, CA 94720-8235
Phone : 510-486-5709     Email : NWMoriarty@LBL.gov
Fax   : 510-486-5909     Web   : CCI.LBL.gov