22 Nov
2011
22 Nov
'11
4:01 p.m.
Hi Hena,
In PDBSET, I can use CHAIN command in shell script to write a pdb file with a desired chain ID. What is the command in shell script to write a pdb file with a desired SEGID?
phenix.pdbtools is the tool to do such manipulations: http://www.phenix-online.org/documentation/pdbtools.htm Examples: - remove chain A: phenix.pdbtools model.pdb remove="chain A" or equivalently: phenix.pdbtools model.pdb keep="not chain A" - remove SEGID: phenix.pdbtools model.pdb remove="segid A" Pavel