Yes, you can:

phenix.refine model.{pdb,mtz} strategy=individual_sites+rigid_body refine.sites.rigid_body="resseq 1" refine.sites.individual="not resseq 1"

In the above command the residue number 1 will be refined as a rigid body while the coordinates of the rest will be refined individually.

Pavel.


On 4/29/10 2:17 PM, Ralf W. Grosse-Kunstleve wrote:
Is it possible to specify individual residues of a chain to undergo rigid
refinement while the rest of the chain does regular refinement?
    

No, sorry.
Ralf
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