Hi Troy, I'm sorry for this problem! This sounds like my problem, not yours...but first can you make sure that you have the most recent version of PHENIX? If you type phenix.version it should say something like; Version: 1.3b Release tag: rc3 If that is ok (or if it still does this when you use that version), then I have to fix something. I tried to make something very similar on my machine: input_data_file fobs.mtz input_labels 'FP' 'SIGFP' 'PHIM' 'FOMM' 'HLAM' 'HLBM' 'HLCM' 'HLDM' 'FreeR_flag' input_pdb_file coords.pdb input_seq_file seq.dat input_hires_file w1.sca and this worked fine with the command: phenix.runWizard AutoBuild test.inp If all this does not solve the problem, can you possibly send me the input files and I'll try to duplicate the problem here? Thanks! -Tom T
Hi all,
I seem to be having a problem specifying the labels for the Hires dataset for an Autobuild run.
Here is my input script: input_data_file sharp.mtz input_labels 'Fdm' 'SIGFPsha' 'PHIdm' 'FOMdm' 'HLAdm' 'HLBdm' 'HLCdm' 'HLDdm' 'FreeR_flag' input_pdb_file ab.pdb input_seq_file seq.dat input_hires_file output.native.sca
Here is the error from the AutoBuild.log file: ************************************************************ Failed to carry out AutoBuild_datafile_info_inputs: 'all_input_hires_labels' ************************************************************
I've tried to use the mtz file from the ImportRawData_run directory and specify the columns by substituting the last line in my input script file with: input_hires_file output_PHX.mtz input_hires_labels 'output.native' 'SIGoutput.native'
which are the only labels I could find from mtzdump and that doesn't work either. What am I missing here? Any suggestions would be greatly appreciated.
Thanks, Troy _______________________________________________ phenixbb mailing list [email protected] http://www.phenix-online.org/mailman/listinfo/phenixbb