Dear Ahmad, one way is to use the smiles string. If taxol if also named Paclitaxel then here it is:

https://pubchem.ncbi.nlm.nih.gov/compound/paclitaxel#section=Canonical-SMILES

Then just watch this video on phenix.elbow

https://www.youtube.com/watch?v=8qVYTUVKlbQ

Br, Georg.

How can I generate restraint files for taxol? 

I attached my taxol.pdb for reference. 

Thanks. 

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