Hi AAA ATPase modelers

 

Could anyone send me the .cif file to define the link between ADP and a BeFx ion?  I’m hoping this has not only the revised angle/bond info between O3B and Be but also the new angle between the Be and Fs different from the planar simple ion.

 

AND, for my hexamer I assume the apply_link.def file then just reads with repetitive 5-line groups:

 

refinement.pdb_interpretation.apply_cif_link {

  data_link = ADP-BEF

  residue_selection_1 = chain A and resname ADP and resseq   901 

  residue_selection_2 = chain A and resname BEF and resseq   902

}

 

Where I change out the chain name but keep calling them residues_selection1 and 2?

 

Many thanks

Heidi

 

 

 

Heidi Schubert

Research Professor

Department of Biochemistry

University of Utah

Rm 116 BPRB

20 S 2030 E

Salt Lake City, UT 84112

[email protected]

801-585-9776