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Hi Nick, I temporarily disabled this option since I've never seen it useful within phenix.refine context. Why don't you use the whole resolution range for the refinement? It should work just fine. Also, doing high resolution refinement in phenix.refine please review "Refinement at high resolution" paragraph of phenix.refine manual (http://www.phenix-online.org/download/cci_apps/). Please let me know if you have any other questions! Pavel. On 3/13/2008 12:42 PM, [email protected] wrote:
Hello,
I am refining a high-resolution X-ray structure and I would like to gradually increase the resolution from 1.5 to 1.0A, as I used to do in shelxl. I know the STIR command is the way to do this, but I cannot figure out the syntax to use. Currently I am using the following commands:
high_resolution = 1.0 low_resolution = None stir = 1.5
When I run phenix.refine (2008_02_08_1610) it echos a line that says "STIR 1.5" before the first macrocycle, but at each stage I see "(resolution: 1.00 - 21.77)." Obviously I am not using the STIR command correctly. Any advice would be greatly appreciated. Thanks in advance.
Nick Silvaggi Department of Physiology and Biophysics Boston University School of Medicine 715 Albany St. R-702 Boston, MA 02118
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