Hi Jerome,

Run phenix.real_space_correlation without argument for usage instructions. It expects a parameter file on the command line (not a PDB file).

Ralf

On Thu, Jan 19, 2012 at 12:46 PM, Jerome Nwachukwu <[email protected]> wrote:

Hi:
I am trying to run phenix.real_space_correlation from the command line and received the following error message. Is there a specific syntax i should use?

Thank you,
-Jerome


Syntax error: expected "=", found "Date" (file "3_refine_001.pdb", line 1)
Traceback (most recent call last):
 File "/usr/local/phenix-1.7.1-743/cctbx_project/mmtbx/command_line/real_space_correlation.py", line 9, in <module>
   command_name = "phenix.real_space_correlation")
 File "/usr/local/phenix-1.7.1-743/cctbx_project/mmtbx/real_space_correlation.py", line 332, in cmd_run
   track_unused_definitions = True)
 File "/usr/local/phenix-1.7.1-743/cctbx_project/libtbx/phil/__init__.py", line 1718, in fetch
   assert source.name == self.name
AttributeError: 'NoneType' object has no attribute 'name'
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