Hi George,

On 7/30/14, 9:28 AM, George Devaniranjan wrote:

I am confused by omega_esd_override_value

What is it supposed to do?

sources/cctbx_project % libtbx.find_files -g omega_esd_override_value
./mmtbx/monomer_library/pdb_interpretation.py:     omega_esd_override_value = None
./mmtbx/monomer_library/pdb_interpretation.py:             if (peptide_link_params.omega_esd_override_value is not None):
./mmtbx/monomer_library/pdb_interpretation.py:               assert peptide_link_params.omega_esd_override_value > 0
./mmtbx/monomer_library/pdb_interpretation.py:               proxy.weight = 1/peptide_link_params.omega_esd_override_value**2

Hopefully this makes it clearer.
Pavel