Dear Phenix users
I am new to Phenix..probably my question might be childish to you. so with appologies, 
I have predicted protein structure by using modeller, i want to refine my structure but i am unable to know that what is MTZ files n CIF files because i have only my PDB. And i want to fix beta deviations and outliers, bad angles and bad bonds in my structure.
 kindly help me and suggest me that what can i do to refine my structure.

Best Regards

--
Saba Ferdous
Research Scholar (M. Phil)
National Center for Bioinformatics
Quaid-e-Azam University, Islamabad
Pakistan