Hi Michael,
Currently the only way to run the DEN implementation in Phenix on a SGE
cluster would be to submit a set of individual jobs with different
weight/gamma pairs. Adding more direct SGE support is on our list of things
to add, and hopefully that will happen soon.
Jeff
On Tue, Nov 13, 2012 at 6:56 PM, Michael Thompson
Hi All,
Apologies if this is a naive question, but I would like to run DEN refinement and I notice the documentation says that it runs optimally on a machine with at least 30 processor cores. Is there any way to run DEN refinement on a SGE cluster as a batch job using something like run_command="qsub" as can be done with autobuild, etc.?
Thanks,
Mike
-- Michael C. Thompson
Graduate Student
Biochemistry & Molecular Biology Division
Department of Chemistry & Biochemistry
University of California, Los Angeles
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