Hi, Dear all,
I was using phenix.refine to refine the structure. Once I turned on optimize_wxc w/o optimize_wxu, the job failed with the following message.
----------xray term weight optimization (wxc)----------
Traceback (most recent call last):
File "/Application/phenix/phenix-1.3b-rc6/phenix/phenix/command_line/refine.py", line 5, in <module>
command_line.run(command_name="phenix.refine", args=sys.argv[1:])
File "/Application/phenix/phenix-1.3b-rc6/phenix/phenix/refinement/command_line.py", line 82, in run
call_back_after_monitor_collect=call_back_after_monitor_collect)
File "/Application/phenix/phenix-1.3b-rc6/phenix/phenix/refinement/driver.py", line 1143, in run
call_back_after_monitor_collect = call_back_after_monitor_collect)
File "/Application/phenix/phenix-1.3b-rc6/phenix/phenix/refinement/strategies.py", line 449, in refinement_machine
log = log)
File "/Application/phenix/phenix-1.3b-rc6/phenix/phenix/refinement/weight_xray_chem.py", line 256, in __init__
self.wxc_optimization()
File "/Application/phenix/phenix-1.3b-rc6/phenix/phenix/refinement/weight_xray_chem.py", line 511, in wxc_optimization
wxc = self.holder.wxc
The phenix I used is the latest version, 1.3b rc6.
The platform is intel-linux-2.6 redhat-e4.
Python is 2.4.2
Could anyone please tell me what the problem is?
Thank you very much!
--
Best Regards,
Shi Jiahai