Hi Pavel,
I'm digging in docs and list serv but could not find out, and
figured you probably know faster.
I need to make an
occ.params file for some groups of non adjacent side
chains which interact with each other, and associated waters.
1) How do I select ACs
2) How do I constrain water occupancies so that their Q + that of
coupled protein atomes does not exceed 1. If I match the
AC flags for the waters and side chains will this take care of
it.
e.g. if residues 2 and 21 have coupled ACs and waters 101 and 102
move in when residue 21 is in one of its ACs how would I define
below?
refinement {
refine {
occupancies {
constrained_group {
selection = chain A and
resseq 2
selection =
chain A and resseq 21
selection =
chain W and resseq 101
selection =
chain W and resseq 102
}
}
Thanks !!!
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Mark Mayer Ph.D.