On Sat, May 29, 2010 at 2:27 PM, Susan Tsutakawa <setsutakawa@lbl.gov> wrote:
Continuing the conversation on looking at Phenix maps in pymol, what is the best way to generate .xplor maps in Autobuild.  I would like to generate a figure in pymol with an omit map.   I wasn't able to find documentation explicitly stating how this can be done.

The GUI generates XPLOR maps automatically; otherwise, I don't think there's a simple mechanism in Phenix for this right now.  I started working on a script for this but got sidetracked - I'll see if I can dust off the code and get something working for the next release.

For now, I'd recommend using the FFT program in CCP4.

-Nat