Re: [phenixbb] Phenix command to align the PDB sequence and input sequence

Dear All, I mean the Phenix command to extract the sequence from the PDB file and align it with the input sequence for refine. Smith At 2015-04-10 16:20:23, "Folmer Fredslund" wrote: Hi Smith, PHENIX uses muscle (http://www.drive5.com/muscle/) to align sequences (https://www.phenix-online.org/documentation/phenix_gui.html#other-tools). You can access muscle with "phenix.muscle" on the command line. Hope this helps, Folmer Fredslund 2015-04-10 9:20 GMT+02:00 Smith Liu : Dear All, Will you please tell me the Phenix command to align the PDB sequence and input sequence? I am looking forward to getting your reply. Smith _______________________________________________ phenixbb mailing list [email protected] http://phenix-online.org/mailman/listinfo/phenixbb Unsubscribe: [email protected] -- Folmer Fredslund