Hi Tom,<div><br></div><div>The ncs copy problem is fixed by setting rebuild_in_place=False. The outcome does have 6 chains in the au. </div><div><br></div><div>Facts: </div><div>-input: a sequence file, a pdb model file, an mtz file; the sequence file is the same as the pdb model except that the sequence file has 6 more residues at N-terminal; the pdb model is almost the same as my protein structure.  </div>
<div><br></div><div>-problem: the output chain sequence is not the same as the sequence file (not the same as the input model file either). It misses some residues at the N-terminal and it adds some residues at the C-terminal (but disconnected from the C-terminal). Is it normal in autobuild? How to correct it?</div>
<div><br></div><div>Thanks.</div><div><br></div><div>Jason</div><div><br></div><div>U Pitt</div><div><br><div class="gmail_quote"><br></div></div>