On Thu, Aug 22, 2013 at 9:26 AM, Morten Grøftehauge <mortengroftehauge.work@gmail.com> wrote:
I am quite okay with not everything being documented from top to bottom. I found it weird that the GUI documentation wasn't linked up in the documentation index.

Ah, yes, that would be my mistake.
 
And I think an easier hack would be to write in the error message:
Example:
xray_data.file_name=reflections.hkl=hklf3

Example syntax is the simplest way to explain anything.

Agreed, but the reason this doesn't happen is that not all of the programs that can trigger the error use the same input syntax, usually because they predate the common configuration system that most of the programs in Phenix now use, and we haven't had time to modernize everything.

-Nat