Hi,
please define "refinement still not working". I think phenix.refine wont accept UNX because it has undefined scattering type.
Pavel
On 5/22/20 13:41, Nigel Moriarty wrote:
Muhammad
There is an option in refinement that will determine the ion that best fits a density blob. You should try that after removing the UNX.
Cheers
Nigel
---Nigel W. Moriarty
Building 33R0349, Molecular Biophysics and Integrated BioimagingLawrence Berkeley National Laboratory
Berkeley, CA 94720-8235
Phone : 510-486-5709 Email : NWMoriarty@LBL.gov
Fax : 510-486-5909 Web : CCI.LBL.gov
On Fri, May 22, 2020 at 1:27 PM Muhammad Bashir Khan <mbk@ualberta.ca> wrote:
Hi there;_______________________________________________
I find some unknown density in my map, where I put SO4 and in some UNX. I merged and save all in one PDB. I run ReadySet to make cif. file, but refinement still not working. Can anybody explain what else I should provide?
Thanks in advance
Bashir--
------------------------------------------------------Muhammad Bashir Khan, Ph.D.
Research Associate
Department of Biochemistry
Medical Science Bldg.
Lab 3-27
University of Alberta
Edmonton AB, T6G 2H7
Phone: 780-492-4577-
e-mail: mbk@ualberta.ca
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